idc-index-data / clinical_index_schema.json
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{
"table_description": "This table contains metadata about the tabular data, including clinical data, accompanying images that is available in IDC. Think about this table as a dictionary containing information about the columns for all of the tabular data accompanying individual collections in IDC. Each row corresponds to a unique combination of collection, clinical data table that is available for that collection, and a column from that table. Individual tables referenced from this table can be retrieved using idc-index `get_clinical_table()` function.",
"columns": [
{
"name": "collection_id",
"type": "STRING",
"mode": "NULLABLE",
"description": "unique identifier of the collection"
},
{
"name": "table_name",
"type": "STRING",
"mode": "NULLABLE",
"description": "full name of the table in which the column is stored"
},
{
"name": "short_table_name",
"type": "STRING",
"mode": "NULLABLE",
"description": "short name of the table in which the column is stored"
},
{
"name": "column",
"type": "STRING",
"mode": "NULLABLE",
"description": ""
},
{
"name": "column_label",
"type": "STRING",
"mode": "NULLABLE",
"description": "human readable name of the column"
},
{
"name": "values",
"type": "RECORD",
"mode": "REPEATED",
"description": ""
}
]
}